Literature Mining Tools

We have discussed today two different literature-mining tools.

1) PubMed Reminer: Detailed analysis of PubMed search results.

PubReMiner will query pubmed with your specified searchquery, get all abstracts and generate frequency tables.
The first table will show you journals in which your query is published the most.
The second table will show you the authors which are most active in the field of your query.
The third table will show you words that have been used most in the title and abstract of the articles.
furthermore, Addressfields, MESH headers and publication year are displayed.
All elements can be added to your query, and will thus make sure that your refinement still generates results.
When you are satisfied with the query, you can jump to pubmed and view the results.
Alternative names: PubReMiner, pubmed reminer, pub reminer, pubmed re-miner

2) Chilibot! The smart literature miner…

Find relationships from PubMed abstracts…

This entry was posted on Tuesday, December 5th, 2006 at 12:57 am and is filed under Continuous learning, Workshop 1 (3-5 Dec 06). You can follow any responses to this entry through the RSS 2.0 feed. You can leave a response, or trackback from your own site.

3 Responses to Literature Mining Tools

  1. MOSTAFA says:
    December 5, 2006 at 5:12 pm

    THANK YOU DR.RAMY FOR UR EFFORTS WITH US IN THIS WORKSHOP

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